Some changes
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@ -36,8 +36,8 @@ private:
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std::vector<Particle> particles; ///< The particles in the Penning trap
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sim_arr k_v;
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sim_arr k_r;
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std::function<vec_3d(int, double)> v_funcs[4];
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std::function<vec_3d(int, double)> r_funcs[4];
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std::function<vec_3d(int, double)>* v_funcs;
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std::function<vec_3d(int, double)>* r_funcs;
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public:
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/** @brief Set B_0, V_0 and d.
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@ -29,21 +29,31 @@ PenningTrap::PenningTrap(double B_0, double V_0, double d)
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this->d = d;
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// Create lambda functions for each iteration in RK4
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v_funcs[0] = [this](int i, double dt) { return .5 * dt * this->k_v[0][i]; };
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v_funcs[1] = [this](int i, double dt) { return .5 * dt * this->k_v[1][i]; };
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v_funcs[2] = [this](int i, double dt) { return dt * this->k_v[2][i]; };
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v_funcs[3] = [this](int i, double dt) {
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this->v_funcs = new std::function<vec_3d(int, double)>[] {
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[this](int i, double dt) {
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DEBUG("Inside v_funcs");
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return .5 * dt * this->k_v[0][i];
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},
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[this](int i, double dt) { return .5 * dt * this->k_v[1][i]; },
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[this](int i, double dt) { return dt * this->k_v[2][i]; },
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[this](int i, double dt) {
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return (dt / 6) * (this->k_v[0][i].eval() + this->k_v[1][i].eval() +
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this->k_v[2][i].eval() + this->k_v[3][i].eval());
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}
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};
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r_funcs[0] = [this](int i, double dt) { return .5 * dt * this->k_r[0][i]; };
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r_funcs[1] = [this](int i, double dt) { return .5 * dt * this->k_r[0][i]; };
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r_funcs[2] = [this](int i, double dt) { return dt * this->k_r[2][i]; };
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r_funcs[3] = [this](int i, double dt) {
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this->r_funcs = new std::function<vec_3d(int, double)>[] {
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[this](int i, double dt) {
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DEBUG("Inside v_funcs");
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return .5 * dt * this->k_r[0][i];
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},
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[this](int i, double dt) { return .5 * dt * this->k_r[1][i]; },
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[this](int i, double dt) { return dt * this->k_r[2][i]; },
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[this](int i, double dt) {
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return (dt / 6) * (this->k_r[0][i].eval() + this->k_r[1][i].eval() +
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this->k_r[2][i].eval() + this->k_r[3][i].eval());
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}
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};
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}
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PenningTrap::PenningTrap(int i, double B_0, double V_0, double d)
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@ -143,9 +153,11 @@ vec_3d PenningTrap::total_force(int i)
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void PenningTrap::evolve_RK4(double dt, bool particle_interaction)
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{
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DEBUG("Inside RK4");
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std::vector<Particle> original_particles = this->particles;
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std::vector<Particle> tmp_particles = this->particles;
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DEBUG("Choose force func");
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std::function<vec_3d(int)> force;
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if (particle_interaction) {
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force = [this](int i) { return this->total_force(i); };
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@ -154,22 +166,28 @@ void PenningTrap::evolve_RK4(double dt, bool particle_interaction)
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force = [this](int i) { return this->total_force_external(i); };
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}
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DEBUG("Create k_v and k_r");
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int size = this->particles.size();
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this->k_v = sim_arr(4, sim_cols(size));
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this->k_r = sim_arr(4, sim_cols(size));
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DEBUG("Loop");
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for (int i = 0; i < 4; i++) {
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DEBUG("Inside outer loop");
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#pragma omp parallel for
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for (int j = 0; j < size; j++) {
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DEBUG("Set k_v and k_r");
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this->k_v[i][j] = this->total_force(j) / this->particles[j].m;
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this->k_r[i][j] = this->particles[j].v_vec;
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Particle *p = &tmp_particles[j];
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DEBUG("Update v and r");
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p->v_vec = original_particles[j].v_vec + this->v_funcs[i](j, dt);
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p->r_vec = original_particles[j].r_vec + this->r_funcs[i](j, dt);
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}
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DEBUG("After inner loop");
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this->particles = tmp_particles;
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}
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}
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@ -201,13 +219,16 @@ void PenningTrap::evolve_forward_euler(double dt, bool particle_interaction)
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sim_arr PenningTrap::simulate(double time, unsigned int steps,
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std::string method, bool particle_interaction)
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{
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DEBUG("Inside simulate");
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double dt = time / (double)steps;
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sim_arr res(this->particles.size(), sim_cols(steps));
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DEBUG("Choose function to use");
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std::function<void(double, bool)> func;
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if (method == "rk4") {
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func = [this](double dt, bool particle_interaction) {
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DEBUG("Inside RK4 lambda");
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this->evolve_RK4(dt, particle_interaction);
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};
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}
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@ -221,10 +242,13 @@ sim_arr PenningTrap::simulate(double time, unsigned int steps,
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abort();
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}
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DEBUG("Loop");
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for (size_t j = 0; j < steps; j++) {
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DEBUG("Inside outer loop");
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for (size_t i = 0; i < this->particles.size(); i++) {
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res[i][j] = this->particles[i].r_vec;
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}
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DEBUG("After inner loop");
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func(dt, particle_interaction);
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}
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@ -235,6 +259,7 @@ void PenningTrap::write_simulation_to_dir(std::string path, double time,
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int steps, std::string method,
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bool particle_interaction)
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{
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DEBUG("Inside write to dir");
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if (path.back() != '/') {
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path += '/';
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}
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@ -243,10 +268,12 @@ void PenningTrap::write_simulation_to_dir(std::string path, double time,
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return;
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}
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DEBUG("Create sim_arr");
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sim_arr res = this->simulate(time, steps, method, particle_interaction);
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std::ofstream ofile;
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DEBUG("Loop");
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#pragma omp parallel for private(ofile)
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for (size_t i = 0; i < this->particles.size(); i++) {
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ofile.open(path + "particle_" + std::to_string(i) + ".txt");
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@ -29,10 +29,12 @@ Particle p2(CHARGE, MASS, vec_3d{25., 25., 0.}, vec_3d{0., 40., 5.});
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void simulate_single_particle()
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{
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DEBUG("Inside single particle sim");
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PenningTrap trap(std::vector<Particle>{p1});
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double time = 50.; // microseconds
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DEBUG("Write to dir");
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trap.write_simulation_to_dir("output/simulate_single_particle", time, N);
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}
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@ -82,14 +84,19 @@ void simulate_100_particles()
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int main()
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{
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DEBUG("Start");
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double start = omp_get_wtime();
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DEBUG("Single particle");
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simulate_single_particle();
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DEBUG("Two particles");
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simulate_two_particles();
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DEBUG("Single particle with different steps");
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simulate_single_particle_with_different_steps();
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DEBUG("100 particles");
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simulate_100_particles();
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double end = omp_get_wtime();
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