From 53900b120578d647c166797db2bfa3abe20b7519 Mon Sep 17 00:00:00 2001
From: Cory <cory@balaton.dev>
Date: Tue, 5 Dec 2023 19:32:32 +0100
Subject: [PATCH] Update README

---
 Doxyfile  |  2 +-
 README.md | 12 ++++++------
 2 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/Doxyfile b/Doxyfile
index 8428bbb..3f830cd 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -1237,7 +1237,7 @@ VERBATIM_HEADERS       = YES
 # generated with the -Duse_libclang=ON option for CMake.
 # The default value is: NO.
 
-CLANG_ASSISTED_PARSING = YES
+CLANG_ASSISTED_PARSING = NO
 
 # If the CLANG_ASSISTED_PARSING tag is set to YES and the CLANG_ADD_INC_PATHS
 # tag is set to YES then doxygen will add the directory of each input to the
diff --git a/README.md b/README.md
index 2b70efa..24860c5 100644
--- a/README.md
+++ b/README.md
@@ -45,7 +45,7 @@ Compiling regular binaries is as easy as running this command:
     make
 ```
 
-The binaries will then be inside the **./bin** directory.
+The binaries will then be inside the **bin** directory.
 
 ### Profiling binaries
 
@@ -55,7 +55,7 @@ If you want to profile the programs (specifically the MPI program), then run thi
     make profile
 ```
 
-The binaries will then be inside the **./prof** directory.
+The binaries will then be inside the **prof** directory.
 
 ### Debugging binaries
 
@@ -65,7 +65,7 @@ If you want to debug the code, then use this command:
     make debug
 ```
 
-The binaries will then be inside the **./debug** directory.
+The binaries will then be inside the **debug** directory.
 
 ## Running programs
 
@@ -113,10 +113,10 @@ If you have any problems running the scripts, you might have to run this instead
 
 ### Batch system
 
-For the **phase_transition_mpi** program, there are scripts in the **./slurm_scripts**
+For the **phase_transition_mpi** program, there are scripts in the **slurm_scripts**
 directory that come along with it. This is to be able to run it on a
 batch system using Slurm if you have access to one.
-The only program that should be executed by the user is the **./slurm_scripts/execute.script**
+The only program that should be executed by the user is the **slurm_scripts/execute.script**
 script. You can see how to use this script by doing:
 
 ```shell
@@ -139,7 +139,7 @@ this repo on that system, then compile the MPI program like this:
     make bin/phase_transition_mpi
 ```
 
-After compiling, you can schedule it by using the **./slurm_scripts/execute.script**:
+After compiling, you can schedule it by using the **slurm_scripts/execute.script**:
 
 ```shell
     ./slurm_scripts/execute.script <parameters>