77 lines
1.4 KiB
Bash
Executable File
77 lines
1.4 KiB
Bash
Executable File
#!/bin/bash
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usage() {
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>&2 cat << EOF
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Usage: $0
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[ -h | --help ]
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[ --start-temp input ]
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[ --end-temp input ]
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[ --points input ]
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[ --samples input ]
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[ --array input ]
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[ --time input ]
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[ --account input (required) ]
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EOF
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exit 1
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}
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# Defaults
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start_temp=2.1
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end_temp=2.4
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points_temp=40
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samples=1000000
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array_arg=20
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time_arg="0-00:30:00"
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account=""
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VALID_ARGS=$(getopt -o h --long help,start-temp:,end-temp:,points:,samples:,array:,time:,account: -- "$@")
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if [[ $? -ne 0 ]]; then
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usage
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fi
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eval set -- ${VALID_ARGS}
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while :
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do
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case "$1" in
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-h | --help)
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usage
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shift
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;;
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--start-temp)
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start_temp=$2
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shift 2
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;;
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--end-temp)
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end_temp=$2
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shift 2
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;;
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--points)
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points=$2
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shift 2
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;;
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--samples)
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samples=$2
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shift 2
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;;
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--array)
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array_arg=$(echo "${2// /}")
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shift 2
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;;
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--time)
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time_arg=$2
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shift 2
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;;
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--account)
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account=$2
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shift 2
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;;
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--) shift; break ;;
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esac
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done
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if [ -z "$account" ]; then
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usage
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fi
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sbatch --array=$array_arg --time=$time_arg --account=$account ./slurm_scripts/pt.script $start_temp $end_temp $points_temp $samples
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