From 80cd9b9a6503e5b8a9f0fdcc2cfb7986850e0286 Mon Sep 17 00:00:00 2001
From: Cory <cory@balaton.dev>
Date: Mon, 1 Jan 2024 15:56:51 +0100
Subject: [PATCH] Stuff

---
 Doxyfile  |  2 +-
 README.md | 97 +++++++++++++++++++++++++++++++++++++++++++++++++++++++
 2 files changed, 98 insertions(+), 1 deletion(-)

diff --git a/Doxyfile b/Doxyfile
index 21a8b6e..c59f28d 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -511,7 +511,7 @@ EXTRACT_PRIVATE        = YES
 # methods of a class will be included in the documentation.
 # The default value is: NO.
 
-EXTRACT_PRIV_VIRTUAL   = NO
+EXTRACT_PRIV_VIRTUAL   = YES
 
 # If the EXTRACT_PACKAGE tag is set to YES, all members with package or internal
 # scope will be included in the documentation.
diff --git a/README.md b/README.md
index a0fa25f..62e9bb2 100644
--- a/README.md
+++ b/README.md
@@ -1,3 +1,100 @@
 # Simulating the Schrödinger wave equation using the Crank-Nicolson method in 2+1 dimensions
 
+[Repo](https://github.uio.no/FYS3150-G2-2023/Project-5)
 
+[Documentation](https://pages.github.uio.no/FYS3150-G2-2023/Project-5/)
+
+## Requirements
+
+### Operating systems
+
+- Linux
+  - Has been tested on [Fedora 38](https://fedoraproject.org/)
+  - Will most likely work on other Linux distributions
+- macOS
+  - Will most likely not work due to the use of getopt, which is GNU specific.
+- Windows
+  - Will most likely not work
+
+### Libraries
+
+- Python
+  - [matplotlib](https://matplotlib.org/)
+  - [numpy](https://numpy.org/)
+  - [seaborn](https://seaborn.pydata.org/)
+
+- C++
+  - [Armadillo](https://arma.sourceforge.net/)
+
+## Compiling
+
+The commands shown here should be run from the root of this project.
+
+### Normal binaries
+
+Compiling regular binaries is as easy as running this command:
+
+```shell
+    make
+```
+
+The binaries will then be inside the **bin** directory.
+
+### Debugging binaries
+
+If you want to debug the code, then use this command:
+
+```shell
+    make debug
+```
+
+The binaries will then be inside the **debug** directory.
+
+## Running programs
+
+### C++ binaries
+
+To run any of the programs, just use the following command:
+
+```shell
+    ./<bin|debug>/<program-name> <args>
+```
+
+If you need help with any of the programs, you can use the **-h** or **--help**
+flag to show you how to use the programs. Here is an example:
+
+```shell
+    ./bin/main --help
+```
+
+### Python scripts
+
+#### Install libraries
+
+Before running the scripts, make sure that all libraries are installed.
+Using pip, you can install all requirements like this:
+
+```shell
+    pip install -r requirements.txt
+```
+
+This recursively install all the packages that are listed in **requirements.txt**.
+
+#### Running scripts
+
+For the Python scripts, run them from the root of the project:
+
+```shell
+    python python_scripts/<script-name>
+```
+
+If you have any problems running the scripts, you might have to run this instead:
+
+```shell
+    python3 python_scripts/<script-name>
+```
+
+## Credits
+
+The Doxygen theme used here is
+[doxygen-awesome-css](https://github.com/jothepro/doxygen-awesome-css).